Now showing items 21-40 of 1125

    • The mineralogy and alteration history of the Yamato-type (CY) carbonaceous chondrites

      Suttle, MD; King, AJ; Harrison, CS; Chan, QHS; Greshake, A; Bartoschewitz, R; Tomkins, AG; Salge, T; Schofield, PF; Russell, SS (Elsevier BV, 2023-09-30)
      The CY chondrites are a group of thermally metamorphosed carbonaceous chondrites. Although they share similarities with the CM and CI chondrites, their primary properties argue for a distinct classification. Previous studies have highlighted their isotopically heavy bulk compositions (δ17O = 10 ‰, δ18O = 21 ‰, Δ17O = 0 ‰) and exceptionally high sulphide abundances (10–30 vol%). In this work we explore their petrography and alteration history. The CYs accreted low abundances of chondrules (15–20 area%) with average apparent diameters slightly larger (∼320–340 µm) than the CM chondrites. In contrast to the CMs, the CYs record an early episode of brecciation prior to the main window of aqueous alteration. Subsequent fluid activity produced a range of alteration extents with both CY2 and CY1 chondrites documented. Phyllosilicate minerals in the CYs were a mix of serpentine and saponite (including occurrences of Na-saponite) with minor quantities of chlorite (within chondrules). An initial generation of Fe-sulphides formed by sulfidation of metal, and by precipitation from S-rich fluids. Three generations of carbonates are recognized, an early generation that infilled voids left by brecciation and co-precipitated with sulphide, a later generation that co-precipitated with magnetite and a final Fe-Mg-bearing generation which formed large (>100 µm) clasts. Only the first-generation carbonates are found in the CY2s, while the CY1s preserve all three generations. Phosphates occur as Ca-apatite or rarely as Mg-bearing apatite and have hydroxylapatite compositions, indicating low halogen activities in the alteration fluids. Refractory oxides (ilmenite and Cr-spinel) occur as precipitates adhering to the margins of phyllosilicates. They formed late in the alteration sequence and attest to oxidizing conditions. During the late-stages of aqueous alteration Fe-sulphides were replaced by magnetite. Thermal metamorphism (Stage II-IV: ∼300–750 °C) overprinted aqueous alteration leading to dehydration and recrystallization of the phyllosilicate matrix and the decomposition of some carbonate phases. Most Fe-sulphide grains survived heating without decomposition as initial partial decomposition from pyrrhotite to troilite under closed system conditions led to elevated ƒS2 gas and resulted in a stabilizing effect. Retrograde reactions between trapped S2 gas and metal/magnetite formed a final generation of Fe-sulphides. The survival of Fe-sulphides and their stochiometric troilite compositions are evidence for near-closed system heating. Analysis of organic matter by Raman spectroscopy supports an interpretation of short-duration heating (on the scale of minutes to days), at peak temperatures between 750 and 900 °C. Thus, an impact event was the most likely cause of metamorphic heating.
    • The Winchcombe meteorite, a unique and pristine witness from the outer solar system

      King, Ashley J; Daly, Luke; Rowe, James; Joy, Katherine H; Greenwood, Richard C; Devillepoix, Hadrien AR; Suttle, Martin D; Chan, Queenie HS; Russell, Sara; Bates, Helena C; et al. (American Association for the Advancement of Science (AAAS), 2022-11-16)
      Direct links between carbonaceous chondrites and their parent bodies in the solar system are rare. The Winchcombe meteorite is the most accurately recorded carbonaceous chondrite fall. Its pre-atmospheric orbit and cosmic-ray exposure age confirm that it arrived on Earth shortly after ejection from a primitive asteroid. Recovered only hours after falling, the composition of the Winchcombe meteorite is largely unmodified by the terrestrial environment. It contains abundant hydrated silicates formed during fluid-rock reactions, and carbon- and nitrogen-bearing organic matter including soluble protein amino acids. The near-pristine hydrogen isotopic composition of the Winchcombe meteorite is comparable to the terrestrial hydrosphere, providing further evidence that volatile-rich carbonaceous asteroids played an important role in the origin of Earth’s water.
    • The Winchcombe meteorite—A regolith breccia from a rubble pile <scp>CM</scp> chondrite asteroid

      Suttle, MD; Daly, L; Jones, RH; Jenkins, L; Van Ginneken, M; Mitchell, JT; Bridges, JC; Hicks, LJ; Johnson, D; Rollinson, G; et al. (Wiley, 2024-05)
      Abstract The Winchcombe meteorite is a CM chondrite breccia composed of eight distinct lithological units plus a cataclastic matrix. The degree of aqueous alteration varies between intensely altered CM2.0 and moderately altered CM2.6. Although no lithology dominates, three heavily altered rock types (CM2.1–2.3) represent &gt;70 area%. Tochilinite–cronstedtite intergrowths (TCIs) are common in several lithologies. Their compositions can vary significantly, even within a single lithology, which can prevent a clear assessment of alteration extent if only TCI composition is considered. We suggest that this is due to early alteration under localized geochemical microenvironments creating a diversity of compositions and because later reprocessing was incomplete, leaving a record of the parent body's fluid history. In Winchcombe, the fragments of primary accretionary rock are held within a cataclastic matrix (~15 area%). This material is impact‐derived fallback debris. Its grain size and texture suggest that the disruption of the original parent asteroid responded by intergranular fracture at grain sizes &lt;100 μm, while larger phases, such as whole chondrules, splintered apart. Re‐accretion formed a poorly lithified body. During atmospheric entry, the Winchcombe meteoroid broke apart with new fractures preferentially cutting through the weaker cataclastic matrix and separating the breccia into its component clasts. The strength of the cataclastic matrix imparts a control on the survival of CM chondrite meteoroids. Winchcombe's unweathered state and diversity of lithologies make it an ideal sample for exploring the geological history of the CM chondrite group.
    • Recovery and curation of the Winchcombe (<scp>CM2</scp>) meteorite

      Russell, Sara; King, A; Bates, Helena C; Almeida, Natasha V; Greenwood, Richard C; Daly, Luke; Joy, Katherine H; Rowe, Jim; Salge, T; Smith, Caroline L; et al. (Wiley, 2024-05)
      Abstract: The Winchcombe meteorite fell on February 28, 2021 and was the first recovered meteorite fall in the UK for 30 years, and the first UK carbonaceous chondrite. The meteorite was widely observed by meteor camera networks, doorbell cameras, and eyewitnesses, and 213.5 g (around 35% of the final recovered mass) was collected quickly—within 12 h—of its fall. It, therefore, represents an opportunity to study very pristine extra‐terrestrial material and requires appropriate careful curation. The meteorite fell in a narrow (600 m across) strewn field ~8.5 km long and oriented approximately east–west, with the largest single fragment at the farthest (east) end in the town of Winchcombe, Gloucestershire. Of the total known mass of 602 g, around 525 g is curated at the Natural History Museum, London. A sample analysis plan was devised within a month of the fall to enable scientists in the UK and beyond to quickly access and analyze fresh material. The sample is stored long term in a nitrogen atmosphere glove box. Preliminary macroscopic and electron microscopic examinations show it to be a CM2 chondrite, and despite an early search, no fragile minerals, such as halite, sulfur, etc., were observed.
    • Fossil micrometeorites from Monte dei Corvi: Searching for dust from the Veritas asteroid family and the utility of micrometeorites as a palaeoclimate proxy

      Suttle, MD; Campanale, F; Folco, L; Tavazzani, L; Meier, MMM; Miller, CG; Hughes, G; Genge, MJ; Salge, T; Spratt, J; et al. (Elsevier BV, 2023-06-29)
      We searched late Miocene sedimentary rocks in an attempt to recover fossil micrometeorites derived from the Veritas asteroid family. This study was motivated by the previous identification of a pronounced 3He peak (4-5x above background) within marine sediments with ages between ∼8.5–6.9 Ma ago (Montanari et al., 2017. GSA Bulletin, 129:1357–1376). We processed 118.9 kg of sediment from the Monte dei Corvi beach section (Italy), the global type-section for the Tortonian epoch (11.6–7.2 Ma). Samples were collected both before and within the 3He peak. Although a small number of iron-rich (I-type) fossil micrometeorites were recovered from each horizon studied (Ntotal = 20), there is no clear difference between the pre- and intra- 3He peak samples. All micrometeorites are compositionally similar, and three out of five horizons yielded similar abundances and particle sizes. Micrometeorites extracted from sediments at the base of the 3He peak were exclusively small (ø <75 µm), while micrometeorites extracted from sediments near the highest 3He values were relatively large (ø <270 µm). The recovered fossil micrometeorites are interpreted as samples of the background dust flux derived from metal-bearing chondritic asteroids. The presence of a 3He signature combined with the absence of fossil micrometeorites or extraterrestrial spinels (Boschi et al., 2019, Spec. Pap. Geol. Soc. Am. 542:383–391) unambiguously related to the Veritas event suggests that the Veritas family is composed of highly friable materials that rarely survive on the sea floor to become preserved in the geological record. Our data supports the existing hypothesis that the Veritas asteroid family is an aqueously altered carbonaceous chondrite parent body, one that contains minimal native metal grains or refractory Cr-spinels. The low yield of fossil micrometeorites at Monte dei Corvi is attributed to loss of particles by dissolution whilst they resided on the sea floor but also due to high sedimentation rates leading to dilution of the extraterrestrial dust flux at this site. As with other fossil micrometeorite collections (e.g. Cretaceous chalk [Suttle and Genge, EPSL, 476:132–142]) the I-type spherules have been altered since deposition. In most particles, both magnetite and wüstite remain intact but have been affected by solid state geochemical exchange, characterised by partial leaching of Ni, Co and Cr and implantation of Mn, Mg, Si and Al. In some particles Mn concentrations reach up to 16.6 wt%. Conversely, in some micrometeorites wüstite has been partially dissolved, or even replaced by calcite or ankerite. Finally, we observe evidence for wüstite recrystallisation, forming a second generation of magnetite. This process is suggested to occur by oxidation during residence on the seafloor and has implications for the use of fossil I-type micrometeorites as a potential proxy for probing Earth’s upper atmospheric composition (oxidative capacity) in the geological past. However, solutions to the limitations of post-depositional recrystallisation are suggested. Fossil I-type spherules remain a potential tool for palaeo-climatic studies.
    • Detection and Quantification of Extraterrestrial Platinum Group Element Alloy Micronuggets from Archean Impactite Deposits by Low-Voltage Scanning Electron Microscopy/Energy-Dispersive X-ray Spectrometry

      Salge, T; Mohr-Westheide, Tanja (Oxford University Press (OUP), 2023-08-02)
      Abstract Rare, heterogeneously composed platinum group element alloy micronuggets (PGNs) occur in primitive meteorites, micrometeorites, and terrestrial impactite deposits. To gain insight into the nature of these phases, we developed a workflow for the characterization of PGNs using modern scanning electron microscopy (SEM) and energy-dispersive X-ray spectrometry at a low accelerating voltage of 6 kV. Automated feature analysis—a combination of morphological image analysis and elemental analysis with stage control—allowed us to detect PGNs down to 200 nm over a relatively large analysis area of 53 mm2 with a conventional silicon drift detector (SDD). Hyperspectral imaging with a high-sensitivity, annular SDD can be performed at low beam current (∼100 pA) which improves the SEM image resolution and minimizes hydrocarbon contamination. The severe overlapping peaks of the platinum group element L and M line families at 2–3 keV and the Fe and Ni L line families at &amp;lt;1 keV can be resolved by peak deconvolution. Quantitative elemental analysis can be performed at a spatial resolution of &amp;lt;80 nm; however, the results are affected by background subtraction errors for the Fe L line family. Furthermore, the inaccuracy of the matrix correction coefficients may influence standards-based quantification with pure element reference samples.
    • The genome sequence of the centipede Strigamia acuminata (Leach, 1816)

      Edgecombe, GD; Sivell, Duncan (F1000 Research Ltd, 2023-09-21)
      We present a genome assembly from an individual male Strigamia acuminata (centipede; Arthropoda; Chilopoda; Geophilomorpha; Geophilidae; Linotaeniinae). The genome sequence is 237.5 megabases in span. Most of the assembly is scaffolded into 11 chromosomal pseudomolecules, including the X and Y sex chromosomes. The mitochondrial genome has also been assembled and is 15.07 kilobases in length.
    • Raptorial appendages of the Cambrian apex predator<i>Anomalocaris canadensis</i>are built for soft prey and speed

      Bicknell, Russell DC; Schmidt, Michel; Rahman, Imran; Edgecombe, GD; Gutarra Diaz, Susana V.; Daley, Allison C; Melzer, Roland R; Wroe, Stephen; Paterson, John R (The Royal Society, 2023-07-12)
      The stem-group euarthropod Anomalocaris canadensis is one of the largest Cambrian animals and is often considered the quintessential apex predator of its time. This radiodont is commonly interpreted as a demersal hunter, responsible for inflicting injuries seen in benthic trilobites. However, controversy surrounds the ability of A. canadensis to use its spinose frontal appendages to masticate or even manipulate biomineralized prey. Here, we apply a new integrative computational approach, combining three-dimensional digital modelling, kinematics, finite-element analysis (FEA) and computational fluid dynamics (CFD) to rigorously analyse an A. canadensis feeding appendage and test its morphofunctional limits. These models corroborate a raptorial function, but expose inconsistencies with a capacity for durophagy. In particular, FEA results show that certain parts of the appendage would have experienced high degrees of plastic deformation, especially at the endites, the points of impact with prey. The CFD results demonstrate that outstretched appendages produced low drag and hence represented the optimal orientation for speed, permitting acceleration bursts to capture prey. These data, when combined with evidence regarding the functional morphology of its oral cone, eyes, body flaps and tail fan, suggest that A. canadensis was an agile nektonic predator that fed on soft-bodied animals swimming in a well-lit water column above the benthos. The lifestyle of A. canadensis and that of other radiodonts, including plausible durophages, suggests that niche partitioning across this clade influenced the dynamics of Cambrian food webs, impacting on a diverse array of organisms at different sizes, tiers and trophic levels.
    • A new interpretation of Pikaia reveals the origins of the chordate body plan

      Mussini, Giovanni; Smith, M Paul; Vinther, Jakob; Rahman, Imran; Murdock, Duncan JE; Harper, David AT; Dunn, Frances S (Elsevier BV, 2024-06-11)
      Our understanding of the evolutionary origin of Chordata, one of the most disparate and ecologically significant animal phyla, is hindered by a lack of unambiguous stem-group relatives. Problematic Cambrian fossils that have been considered as candidate chordates include vetulicolians (1) Yunnanozoon (2) and the iconic Pikaia (3) However, their phylogenetic placement has remained poorly constrained, impeding reconstructions of character evolution along the chordate stem lineage. Here we reinterpret the morphology of Pikaia, providing evidence for a gut canal and, crucially, a dorsal nerve cord—a robust chordate synapomorphy. The identification of these structures underpins a new anatomical model of Pikaia that shows that this fossil was previously interpreted upside down.We reveal a myomere configuration intermediate between amphioxus and vertebrates and establish morphological links between Yunnanozoon, Pikaia, and uncontroversial chordates. In this light, we perform a new phylogenetic analysis, using a revised, comprehensive deuterostome dataset, and establish a chordate stem lineage. We resolve vetulicolians as a paraphyletic group comprising the earliest diverging stem chordates, subtending a grade of more derived stem-group chordates comprising Yunnanozoon and Pikaia. Our phylogenetic results reveal the stepwise acquisition of characters diagnostic of the chordate crown group. In addition, they chart a phase in early chordate evolution defined by the gradual integration of the pharyngeal region with a segmented axial musculature, supporting classical evolutionary-developmental hypotheses of chordate origins4 and revealing a ‘‘lost chapter’’ in the history of the phylum.
    • Ediacaran marine animal forests and the ventilation of the oceans

      Gutarra, Susana; Mitchell, Emily G; Dunn, Frances S; Gibson, Brandt M; Racicot, Rachel A; Darroch, Simon AF; Rahman, Imran (Elsevier BV, 2024-05-17)
      The rise of animals across the Ediacaran–Cambrian transition marked a step-change in the history of life, from a microbially dominated world to the complex macroscopic biosphere we see today.1,2,3 While the importance of bioturbation and swimming in altering the structure and function of Earth systems is well established,4,5,6 the influence of epifaunal animals on the hydrodynamics of marine environments is not well understood. Of particular interest are the oldest “marine animal forests,”7 which comprise a diversity of sessile soft-bodied organisms dominated by the fractally branching rangeomorphs.8,9 Typified by fossil assemblages from the Ediacaran of Mistaken Point, Newfoundland,8,10,11 these ancient communities might have played a pivotal role in structuring marine environments, similar to modern ecosystems,7,12,13 but our understanding of how they impacted fluid flow in the water column is limited. Here, we use ecological modeling and computational flow simulations to explore how Ediacaran marine animal forests influenced their surrounding environment. Our results reveal how organism morphology and community structure and composition combined to impact vertical mixing of the surrounding water. We find that Mistaken Point communities were capable of generating high-mixing conditions, thereby likely promoting gas and nutrient transport within the “canopy.” This mixing could have served to enhance local-scale oxygen concentrations and redistribute resources like dissolved organic carbon. Our work suggests that Ediacaran marine animal forests may have contributed to the ventilation of the oceans over 560 million years ago, well before the Cambrian explosion of animals.
    • A fungal plant pathogen discovered in the Devonian Rhynie Chert

      Strullu-Derrien, C; Goral, Tomasz; Spencer, Alan RT; Kenrick, P; Catherine Aime, M; Gaya, Ester; Hawksworth, David L (Springer Science and Business Media LLC, 2023-12-01)
      Abstract: Fungi are integral to well-functioning ecosystems, and their broader impact on Earth systems is widely acknowledged. Fossil evidence from the Rhynie Chert (Scotland, UK) shows that Fungi were already diverse in terrestrial ecosystems over 407-million-years-ago, yet evidence for the occurrence of Dikarya (the subkingdom of Fungi that includes the phyla Ascomycota and Basidiomycota) in this site is scant. Here we describe a particularly well-preserved asexual fungus from the Rhynie Chert which we examined using brightfield and confocal microscopy. We document Potteromyces asteroxylicola gen. et sp. nov. that we attribute to Ascomycota incertae sedis (Dikarya). The fungus forms a stroma-like structure with conidiophores arising in tufts outside the cuticle on aerial axes and leaf-like appendages of the lycopsid plant Asteroxylon mackiei. It causes a reaction in the plant that gives rise to dome-shaped surface projections. This suite of features in the fungus together with the plant reaction tissues provides evidence of it being a plant pathogenic fungus. The fungus evidently belongs to an extinct lineage of ascomycetes that could serve as a minimum node age calibration point for the Ascomycota as a whole, or even the Dikarya crown group, along with some other Ascomycota previously documented in the Rhynie Chert.
    • Revisions to the Eocene carpoflora of Anjou, western France, with new data from X-ray tomography

      Strullu-Derrien, C; Spencer, Alan RT; Kenrick, P; Judd, Walter S; De Franceschi, Dario; Manchester, Steven R (Informa UK Limited, 2022-08-07)
      Selected fruits and seeds preserved as molds and casts in sediments from the Anjou flora of Maine-et-Loire have been reexamined with the aid of X-ray tomography. Virtual casts and surface renderings from micro-CT scanning data reveal external and internal morphological characters that were not visible by standard reflected light microscopy. Application of this methodology leads to a revision of the fruit formerly treated as Juglandicarya. It is a 5-valved capsule of likely sapindalean affnity, and is placed in Vaudoisia gruetii (Vaudois-Miéja) gen. et. comb. nov. A seed with the characteristic rumination of Anonaspermum is also recognized for the #rst time, as are capsular fruits of Ericaceae. We note that many disseminules are hidden from optical viewing because they are buried within the hand samples. A more extensive micro-CT scan investigation of more samples, including those showing only fossil leaf impressions at the surface, may be expected to yield a wealth of new information on this classic flora.
    • Towards the analysis of coral skeletal density-banding using deep learning

      Rutterford, Ainsley; Bertini, Leonardo; Hendy, Erica J; Johnson, Kenneth; Summerfield, Rebecca; Burghardt, Tilo (Springer Science and Business Media LLC, 2022-01-04)
      Abstract: X-ray micro–computed tomography (µCT) is increasingly used to record the skeletal growth banding of corals. However, the wealth of data generated is time consuming to analyse for growth rates and colony age. Here we test an artificial intelligence (AI) approach to assist the expert identification of annual density boundaries in small colonies of massive Porites spanning decades. A convolutional neural network (CNN) was trained with µCT images combined with manually labelled ground truths to learn banding-related features. The CNN successfully predicted the position of density boundaries in independent images not used in training. Linear extension rates derived from CNN-based outputs and the traditional method were consistent. In the future, well-resolved 2D density boundaries from AI can be used to reconstruct density surfaces and enable studies focused on variations in rugosity and growth gradients across colony 3D space. We recommend the development of a community platform to share annotated images for AI.
    • Microstructure and crystallographic texture data in modern giant clam shells (Tridacna squamosa and Hippopus hippopus)

      Mills, Kimberley; Muir, Duncan D; Oldroyd, Anthony; John, Eleanor H; Santodomingo, N; Johnson, Kenneth; Hussein, Muhammad Ali Syed; Sosdian, Sindia (Elsevier BV, 2023-12-14)
      This article provides novel data on the microstructure and crystallographic texture of modern giant clam shells (Tridacna squamosa and Hippopus hippopus) from the Coral Triangle region of northeast Borneo. Giant clams have two aragonitic shell layers—the inner and outer shell layer. This dataset focuses on the inner shell layer as this is well preserved and not affected by diagenetic alteration. To prepare samples for analysis, shells were cut longitudinally at the axis of maximum growth and mounted onto thin sections. Data collection involved scanning electron microscopy (SEM) to determine microstructure and SEM based electron backscatter diffraction (EBSD) for quantitative measurement of crystallographic orientation and texture. Post-acquisition reanalysis of saved EBSD patterns to optimize data quality included changing the number of reflectors and band detection mode. We provide EBSD data as band contrast images and colour-coded orientation maps (inverse pole figure maps). Crystallographic co-orientation strength obtained with multiple of uniform density (MUD) values are derived from density distributed pole figures of indexed EBSD points. Raw EBSD data files are also given to ensure repeatability of the steps provided in this article and to allow extraction of further crystallographic properties for future researchers. Overall, this dataset provides 1. a better understanding of shell growth and biomineralization in giant clams and 2. important steps for optimizing data collection with EBSD analyses in biogenic carbonates.
    • Hapalosiphonacean cyanobacteria (Nostocales) thrived amid emerging embryophytes in an early Devonian (407-million-year-old) landscape

      Strullu-Derrien, C; Fercoq, Frédéric; Gèze, Marc; Kenrick, P; Martos, Florent; Selosse, Marc-André; Benzerara, Karim; Knoll, Andrew H (Elsevier BV, 2023-07-10)
      Cyanobacteria have a long evolutionary history, well documented in marine rocks. They are also abundant and diverse in terrestrial environments; however, although phylogenies suggest that the group colonized land early in its history, paleontological documentation of this remains limited. The Rhynie chert (407 Ma), our best preserved record of early terrestrial ecosystems, provides an opportunity to illuminate aspects of cyanobacterial diversity and ecology as plants began to radiate across the land surface. We used light microscopy and super-resolution confocal laser scanning microscopy to study a new population of Rhynie cyanobacteria; we also reinvestigated previously described specimens that resemble the new fossils. Our study demonstrates that all are part of a single fossil species belonging to the Hapalosiphonaceae (Nostocales). Along with other Rhynie microfossils, these remains show that the accommodation of morphologically complex cyanobacteria to terrestrial ecosystems transformed by embryophytes was well underway more than 400 million years ago.
    • Insights into palaeobotany

      Strullu-Derrien, Christine; Servais, Thomas; Kenrick, Paul (Informa UK Limited, 2023-04-11)
    • The Carboniferous (Serpukhovian) macroflora from the “Coteaux du Pont Barré”, Beaulieu-sur-Layon (Maine-et-Loire), South of the Armorican Massif, France

      Strullu-Derrien, C; Ballèvre, Michel; Spencer, Alan RT; Guillou, Erwan; Gislard, Jean-Paul; Lardeux, Hubert; Cleal, Christopher J (Informa UK Limited, 2023-03-08)
      The “Coteaux du Pont Barré” in Beaulieu-sur-Layon is a Regional Natural Reserve which is home to exceptional flora and fauna. Recently fossil plants have been discovered at the site adding to its natural heritage significance. The exposure which is part of the “Sillon Houiller de la Basse-Loire” contains Serpukhovian-age (330–320 Ma) remains of sphenophytes, ferns, and lyginopteridopsid and cycadopsid pteridosperms, which are described for the first time as well as the geology of the site. Most Carboniferous macroflora previously described from the Maine-et-Loire has been based on ex situ specimens from now abandoned and inaccessible coal mines. The newly described macroflora shows evidence of in situ remains and differs somewhat in composition from those reported from the coal workings, especially in the total absence of lycopsids and Calymmotheca pteridosperms, and instead having abundant medullosalean foliage (Neuralethopteris). The co-occurrence of Sphenopteris elegans and Neuralethopteris densifolia suggests a slightly younger age compared to the macrofloras documented from the coal-bearing deposits. However, this could be an ecological consequence of the flora growing in better-drained substrate habitats.
    • Innovation and elaboration on the avian tree of life

      Guillerme, Thomas; Bright, Jen A; Cooney, Christopher R; Hughes, Emma C; Varley, Zoë K; Cooper, N; Beckerman, Andrew P; Thomas, Gavin H (American Association for the Advancement of Science (AAAS), 2023-10-27)
      Widely documented, megaevolutionary jumps in phenotypic diversity continue to perplex researchers because it remains unclear whether these marked changes can emerge from microevolutionary processes. Here, we tackle this question using new approaches for modeling multivariate traits to evaluate the magnitude and distribution of elaboration and innovation in the evolution of bird beaks. We find that elaboration, evolution along the major axis of phenotypic change, is common at both macro- and megaevolutionary scales, whereas innovation, evolution away from the major axis of phenotypic change, is more prominent at megaevolutionary scales. The major axis of phenotypic change among species beak shapes at megaevolutionary scales is an emergent property of innovation across clades. Our analyses suggest that the reorientation of phenotypes via innovation is a ubiquitous route for divergence that can arise through gradual change alone, opening up further avenues for evolution to explore.
    • Charting the Course of Pinniped Evolution: insights from molecular phylogeny and fossil record integration

      Park, Travis; Burin, Gustavo; Lazo-Cancino, Daniela; Rees, Joseph Pierce Gary; Rule, James; Slater, Graham; Cooper, N (Oxford University Press (OUP), 2024-04-19)
      Abstract Pinnipeds (seals, sea lions, walruses, and their fossil relatives) are one of the most successful mammalian clades to live in the oceans. Despite a well-resolved molecular phylogeny and a global fossil record, a complete understanding of their macroevolutionary dynamics remains hampered by a lack of formal analyses that combine these two rich sources of information. We used a meta-analytic approach to infer the most densely sampled pinniped phylogeny to-date (36 recent and 93 fossil taxa) and used phylogenetic paleobiological methods to study their diversification dynamics and biogeographic history. Pinnipeds mostly diversified at constant rates. Walruses however experienced rapid turnover in which extinction rates ultimately exceeded speciation rates from 12-6 Ma, possibly due to changing sea-levels and/or competition with otariids (eared seals). Historical biogeographic analyses including fossil data allowed us to confidently identify the North Pacific and the North Atlantic (plus or minus Paratethys) as the ancestral ranges of Otarioidea (eared seals + walrus) and crown phocids (earless seals), respectively. Yet, despite the novel addition of stem pan-pinniped taxa, the region of origin for Pan-Pinnipedia remained ambiguous. These results suggest further avenues of study in pinnipeds and provide a framework for investigating other groups with substantial extinct and extant diversity.
    • Intraspecific variation in the cochleae of harbour porpoises (Phocoena phocoena) and its implications for comparative studies across odontocetes

      Martins, Maria Clara Iruzun; Park, Travis; Racicot, Rachel; Cooper, N (PeerJ, 2020-04-13)
      In morphological traits, variation within species is generally considered to be lower than variation among species, although this assumption is rarely tested. This is particularly important in fields like palaeontology, where it is common to use a single individual as representative of a species due to the rarity of fossils. Here, we investigated intraspecific variation in the cochleae of harbour porpoises (Phocoena phocoena). Interspecific variation of cochlear morphology is well characterised among odontocetes (toothed whales) because of the importance of the structure in echolocation, but generally these studies use only a single cochlea to represent each species. In this study we compare variation within the cochleae of 18 specimens of P. phocoena with variations in cochlear morphology across 51 other odontocete species. Using both 3D landmark and linear measurement data, we performed Generalised Procrustes and principal component analyses to quantify shape variation. We then quantified intraspecific variation in our sample of P. phocoena by estimating disparity and the coefficient of variation for our 3D and linear data respectively. Finally, to determine whether intraspecific variation may confound the results of studies of interspecific variation, we used multivariate and univariate analyses of variance to test whether variation within the specimens of P. phocoena was significantly lower than that across odontocetes. We found low levels of intraspecific variation in the cochleae of P. phocoena, and that cochlear shape within P. phocoena was significantly less variable than across odontocetes. Although future studies should attempt to use multiple cochleae for every species, our results suggest that using just one cochlea for each species should not strongly influence the conclusions of comparative studies if our results are consistent across Cetacea.