Pangolins, often considered the world’s most trafficked wild mammals, have continued to experience rapid declines across Asia and Africa. All eight species are classed as either Vulnerable, Endangered or Critically Endangered by the International Union for Conservation of Nature (IUCN) Red List. Alongside habitat loss, they are threatened mainly by poaching and/or legal hunting to meet the growing consumer demand for their meat and keratinous scales. Species threat assessments heavily rely on changes in species distributions which are usually expensive and difficult to monitor, especially for rare and cryptic species like pangolins. Furthermore, recent assessments of the threats to pangolins focus on characterising their trade using seizure data which provide limited insights into the true extent of global pangolin declines. As the consequences of habitat modifications and poaching/hunting on species continues to become apparent, it is crucial that we frequently update our understanding of how species distributions change through time to allow effective identification of geographic regions that are in need of urgent conservation actions. Here we show how georeferencing pangolin specimens from natural history collections can reveal how their distributions are changing over time, by comparing overlap between specimen localities and current area of habitat maps derived from IUCN range maps. We found significant correlations in percentage area overlap between species, continent, IUCN Red List status and collection year, but not ecology (terrestrial or arboreal/semi-arboreal). Human population density (widely considered to be an indication of trafficking pressure) and changes in primary forest cover, were weakly correlated with percentage overlap. Our results do not suggest a single mechanism for differences among historical distributions and present-day ranges, but rather show that multiple explanatory factors must be considered when researching pangolin population declines as variations among species influence range fluctuations. We also demonstrate how natural history collections can provide temporal information on distributions and discuss the limitations of collecting and using historical data.

We investigated whether small RNA (sRNA) sequenced from field-collected mosquitoes and chironomids (Diptera) can be used as a proxy signature of viral prevalence within a range of species and viral groups, using sRNAs sequenced from wild-caught specimens, to inform total RNA deep sequencing of samples of particular interest. Using this strategy, we sequenced from adult Anopheles maculipennis s.l. mosquitoes the apparently nearly complete genome of one previously undescribed virus related to chronic bee paralysis virus, and, from a pool of Ochlerotatus caspius and Oc. detritus mosquitoes, a nearly complete entomobirnavirus genome. We also reconstructed long sequences (1503-6557 nt) related to at least nine other viruses. Crucially, several of the sequences detected were reconstructed from host organisms highly divergent from those in which related viruses have been previously isolated or discovered. It is clear that viral transmission and maintenance cycles in nature are likely to be significantly more complex and taxonomically diverse than previously expected.

The genus Macrocnemus is a member of the Tanystropheidae, a clade of non-archosauriform archosauromorphs well known for their very characteristic, elongated cervical vertebrae. Articulated specimens are known from the Middle Triassic of Alpine Europe and China. Although multiple articulated specimens are known, description of the cranial morphology has proven challenging due to the crushed preservation of the specimens. Here we use synchrotron micro computed tomography to analyse the cranial morphology of a specimen of the type species Macrocnemus bassanii from the Besano Formation of Monte San Giorgio, Ticino, Switzerland. The skull is virtually complete and we identify and describe the braincase and palatal elements as well the atlas-axis complex for the first time. Moreover, we add to the knowledge of the morphology of the skull roof, rostrum and hemimandible, and reconstruct the cranium of M. bassanii in 3D using the rendered models of the elements. The circumorbital bones were found to be similar in morphology to those of the archosauromorphs Prolacerta broomi and Protorosaurus speneri. In addition, we confirm the palatine, vomer and pterygoid to be tooth-bearing palatal bones, but also observed heterodonty on the pterygoid and the palatine.

The most common plumage abnormalities in birds involve some form of white feathering, ranging from birds with just a few white feathers to individuals that are completely white. The causes of aberrant white feathers are diverse and, in many cases, unknown. Some are heritable, based on simple, genetically determined changes in the pigmentation process. More commonly, the causes are less clear-cut and can include environmental conditions (particularly in relation to food availability), and the physical condition and/or age of the bird. In this paper, white feathering is explored in three common species: Carrion Crow Corvus corone, Hooded Crow C. cornix and Blackbird Turdus merula. Results from the BTO Abnormal Plumage Survey are summarised, and data from a museum-based study of Blackbirds with plumage abnormalities are reported. In all three species, partly white plumage is recorded regularly and is often referred to incorrectly as albinism or leucism.

This article provides updated information about the Porifera Collection at The Natural History Museum (NHM), London. With very little information available regarding fossil sponge digitization or any similar initiative, this paper covers the type and figured specimens and drawer label content data of the Porifera Collection and also describes the collection and its research potential. With approximately 71,000 specimens, of which more than 60% are Mesozoic, the NHM holdings offer the best Mesozoic sponge collection in the world and one of the most important due to its breadth and depth. The Porifera Collection covers all stratigraphic periods and all taxonomic groups and includes almost 3000 cited and figured specimens including types. Although most of the specimens come from the British Isles, worldwide samples are also present, with abundant specimens from other Commonwealth countries and from Antarctica.

The dove known as Streptopelia risoria (Linnaeus, 1758) has long confused ornithologists. Linnaeus described a domestic variety of a dove whose wild form was then unknown. Its wild counterpart, African Collared Dove, was subsequently named Streptopelia roseogrisea (Sundevall, 1857) but that name’s type series was mixed. Despite this, the name roseogrisea became commonly accepted and was used for both African Collared Dove and its domestic form in avian taxonomy, whilst the name risoria was commonly used by bird-keepers for the domestic form. In 2008 the ICZN ruled that the senior name risoria should have priority for both African Collared Dove and its domestic form, Barbary Dove. Although this decision was appropriate, it was based on incomplete information. Here a detailed history of the use of the name risoria in the ornithological literature is presented, followed by designation of a neotype for roseogrisea to resolve taxonomy.

The red junglefowl Gallus gallus is the ancestor of the domestic chicken and arguably the most important bird species on Earth. Continual gene flow between domestic and wild populations has compromised its gene pool, especially since the last century when human encroachment and habitat loss would have led to increased contact opportunities. We present the first combined genomic and morphological admixture assessment of a native population of red junglefowl, sampled from recolonized parts of its former range in Singapore, partly using whole genomes resequenced from dozens of individuals. Crucially, this population was genomically anchored to museum samples from adjacent Peninsular Malaysia collected ~110–150 years ago to infer the magnitude of modern domestic introgression across individuals. We detected a strong feral–wild genomic continuum with varying levels of domestic introgression in different subpopulations across Singapore. Using a trait scoring scheme, we determined morphological thresholds that can be used by conservation managers to successfully identify individuals with low levels of domestic introgression, and selected traits that were particularly useful for predicting domesticity in genomic profiles. Our study underscores the utility of combined genomic and morphological approaches in population management and suggests a way forward to safeguard the allelic integrity of wild red junglefowl in perpetuity.

Metriorhynchids are an extinct group of Jurassic–Cretaceous crocodylomorphs secondarily adapted to a marine lifestyle. A new metriorhynchid crocodylomorph from the Oxford Clay Formation (Callovian, Middle Jurassic) of England is described. The specimen is a large, fragmentary skull and associated single ramus of a lower jaw uniquely preserved in a septarian concretion. The description of the specimen reveals a series of autapomorphies (apicobasal flutings on the middle labial surface of the tooth crowns, greatly enlarged basoccipital tuberosities) and a unique combination of characters that warrant the creation of a new genus and species: Ieldraan melkshamensis gen. et sp. nov. This taxon shares numerous characters with the Late Jurassic–Early Cretaceous genus Geosaurus: tooth crowns that have three apicobasal facets on their labial surface, subtly ornamented skull and lower jaws elements, and reception pits along the lateral margin of the dentary (maxillary overbite). Phylogenetic analysis places this new species as the sister taxon to Geosaurus. The new taxon adds valuable information on the time of origin of the macrophagous subclade Geosaurini, which was initially thought to have evolved and radiated during the Late Jurassic. The presence of Ieldraan melkshamensis, the phylogenetic re-evaluation of Suchodus durobrivensis as a Plesiosuchus sister taxon and recently identified Callovian Dakosaurus-like specimens in the Oxford Clay Formation, indicate that all major Geosaurini lineages originated earlier than previously supposed. This has major implications for the evolution of macropredation in the group. Specifically, we can now demonstrate that the four different forms of true ziphodonty observed in derived geosaurins independently evolved from a single non-functional microziphodont common ancestor.