There are more than 1.2 billion biological specimens in the world’s museums and herbaria. These objects are particularly important forms of biological sample and observation. They underpin biological taxonomy but the data they contain have many other uses in the biological and environmental sciences. Nevertheless, from their conception they are almost entirely documented on paper, either as labels attached to the specimens or in catalogues linked with catalogue numbers. In order to make the best use of these data and to improve the findability of these specimens, these data must be transcribed digitally and made to conform to standards, so that these data are also interoperable and reusable. Through various digitization projects, the authors have experimented with transcription by volunteers, expert technicians, scientists, commercial transcription services and automated systems. We have also been consumers of specimen data for taxonomical, biogeographical and ecological research. In this paper, we draw from our experiences to make specific recommendations to improve transcription data. The paper is split into two sections. We first address issues related to database implementation with relevance to data transcription, namely versioning, annotation, unknown and incomplete data and issues related to language. We then focus on particular data types that are relevant to biological collection specimens, namely nomenclature, dates, geography, collector numbers and uniquely identifying people. We make recommendations to standards organizations, software developers, data scientists and transcribers to improve these data with the specific aim of improving interoperability between collection datasets.

Comets are typically considered to be pristine remnants of the early solar system. However, by definition they evolve significantly over their lifetimes through evaporation, sublimation, degassing and dust release. This occurs once they enter the inner solar system and are heated by the Sun. Some comets (e.g. 1P/Halley, 9P/Tempel and Hale-Bopp) as well as chondritic porous cosmic dust – released from comets – show evidence of minor aqueous alteration resulting in the formation of phyllosilicates, carbonates or other secondary phases (e.g. Cu-sulphides, amphibole and magnetite). These observations suggest that (at least some) comets experienced limited interaction with liquid water under conditions distinct from the alteration histories of hydrated chondritic asteroids (e.g. the CM and CR chondrites). This synthesis paper explores the viability of perihelion-induced heating as a mechanism for the generation of highly localised subsurface liquid water and thus mild aqueous alteration in periodic comets. We draw constraints from experimental laboratory studies, numerical modelling, spacecraft observations and microanalysis studies of cometary micrometeorites. Both temperature and pressure conditions necessary for the generation and short-term (hour-long) survival of liquid water are plausible within the immediate subsurface (<0.5m depth) of periodic comets with small perihelia (<1.5 A.U.), low surface permeabilities and favourable rotational states (e.g. high obliquities and/or slow rotational periods). We estimate that solar radiant heating may generate liquid water and perform aqueous alteration reactions in 3-9% of periodic comets. An example of an ideal candidate is 2P/Encke which has a small perihelion (0.33 A.U.), a high obliquity and a short orbital period. This comet should therefore be considered a high priority candidate in future spectroscopic studies of comet surfaces. Small quantities of phyllosilicate generated by aqueous alteration may be important in cementing together grains in the subsurface of older dormant comets, thereby explaining observations of unexpectedly high tensile strength in some bodies. Most periodic comets which currently pass close to the Sun are dormant, having experienced surface heating, significant cometary activity and dust release in the past. These bodies may be responsible for the partially hydrated cometary micrometeorites we find at the Earth’s surface and their aqueous alteration histories may have been produced by perihelion-induced subsurface heating. This is in contrast to radiogenic and impact heating that operated during the early solar system on asteroids. This study has implications for the alteration history of the active asteroid Phaethon, the target of JAXA’s DESTINY+ mission.

Bulk oxygen isotope data has the potential to match extraterrestrial samples to parent body sourcesbased on distinctive 𝛿 18O and Δ 17 O ratios. We analysed 10 giant (>500µm) micrometeorites using combined µCT and O-isotope analysis to pair internal textures to inferred parent body groups. We identify three ordinary chondrite particles (L and LL groups), four from CR chondrites and the first micrometeorite from the enstatite chondrite (EH4) group. In addition, two micrometeorites are from hydrated carbonaceous chondrite parent bodies with 16 O-poor isotopic compositions above the terrestrial fractionation line. They experienced intense aqueous alteration, contain pseudomorphic chondrules and are petrographically similar to the CM1/CR1 chondrites. These micrometeorites may be members of the newly established CY chondrites and/or derived from the enigmatic “Group 4” micrometeorite population, previously identified by Yada et al., 2005 [GCA, 69:5789-5804], Suavet et al., 2010 [EPSL, 293:313-320] (and others). One of our 16 O-poor micrometeorite plots on the same isotopic trendline as the CO, CM and CY chondrites – “the CM mixing line” (with a slope of ~0.7 and a 𝛿 17 O intercept of -4.23‰), implies a close relationship and potentially a genetic link to these hydrated chondrites. If position along the CM mixing line reflects the amount of 16 O-poor (heavy) water-ice accreted onto the parent body at formation, then the CY chondrites and these 16 O-poor micrometeorites must have accreted at least as much water-ice as CM chondrites but potentially more. In addition, thermal metamorphism could have played a role in further raising the bulk O isotope compositions through the preferential loss of isotopically light water during phyllosilicate dehydration. The study of micrometeorites provides insights into asteroid belt diversity through the discovery of material not currently sampled by larger meteorites, perhaps as a result of atmospheric entry biases preventing the survival of large blocks of friable hydrated material.

The scientific board of the International Geoscience Programme (IGCP), jointly sponsored by IUGS and UNESCO, approved for funding in March 2018 the IGCP-662 project (2018-2023) entitled “Orogenic architecture and crustal growth from accretion to collision”. Four meetings and field excursion, as well as training courses, have been successfully held respectively in 2018 and 2019. The first workshop was held during 21th - 22nd September 2018 in Beijing, China, with a 5-day (15th - 19th September) preworkshop field trip and one-day (23 September 2018) post-conference training course on “Using isotopes in zircon and sulfides to understanding crust-mantle evolution”. The second workshop and field trip of the IGCP-662 project were held in Mongolia from July 4th - 10th, 2019. Besides, the IGCP-662 project joined as co-sponsor the organization of an international symposium “The Geology of Eurasia” held at the Helmholtz-Centre Potsdam - German Research Centre for Geosciences (GFZ) during 26th June - 1st July 2019.

Pangolins, often considered the world’s most trafficked wild mammals, have continued to experience rapid declines across Asia and Africa. All eight species are classed as either Vulnerable, Endangered or Critically Endangered by the International Union for Conservation of Nature (IUCN) Red List. Alongside habitat loss, they are threatened mainly by poaching and/or legal hunting to meet the growing consumer demand for their meat and keratinous scales. Species threat assessments heavily rely on changes in species distributions which are usually expensive and difficult to monitor, especially for rare and cryptic species like pangolins. Furthermore, recent assessments of the threats to pangolins focus on characterising their trade using seizure data which provide limited insights into the true extent of global pangolin declines. As the consequences of habitat modifications and poaching/hunting on species continues to become apparent, it is crucial that we frequently update our understanding of how species distributions change through time to allow effective identification of geographic regions that are in need of urgent conservation actions. Here we show how georeferencing pangolin specimens from natural history collections can reveal how their distributions are changing over time, by comparing overlap between specimen localities and current area of habitat maps derived from IUCN range maps. We found significant correlations in percentage area overlap between species, continent, IUCN Red List status and collection year, but not ecology (terrestrial or arboreal/semi-arboreal). Human population density (widely considered to be an indication of trafficking pressure) and changes in primary forest cover, were weakly correlated with percentage overlap. Our results do not suggest a single mechanism for differences among historical distributions and present-day ranges, but rather show that multiple explanatory factors must be considered when researching pangolin population declines as variations among species influence range fluctuations. We also demonstrate how natural history collections can provide temporal information on distributions and discuss the limitations of collecting and using historical data.

We investigated whether small RNA (sRNA) sequenced from field-collected mosquitoes and chironomids (Diptera) can be used as a proxy signature of viral prevalence within a range of species and viral groups, using sRNAs sequenced from wild-caught specimens, to inform total RNA deep sequencing of samples of particular interest. Using this strategy, we sequenced from adult Anopheles maculipennis s.l. mosquitoes the apparently nearly complete genome of one previously undescribed virus related to chronic bee paralysis virus, and, from a pool of Ochlerotatus caspius and Oc. detritus mosquitoes, a nearly complete entomobirnavirus genome. We also reconstructed long sequences (1503-6557 nt) related to at least nine other viruses. Crucially, several of the sequences detected were reconstructed from host organisms highly divergent from those in which related viruses have been previously isolated or discovered. It is clear that viral transmission and maintenance cycles in nature are likely to be significantly more complex and taxonomically diverse than previously expected.

The genus Macrocnemus is a member of the Tanystropheidae, a clade of non-archosauriform archosauromorphs well known for their very characteristic, elongated cervical vertebrae. Articulated specimens are known from the Middle Triassic of Alpine Europe and China. Although multiple articulated specimens are known, description of the cranial morphology has proven challenging due to the crushed preservation of the specimens. Here we use synchrotron micro computed tomography to analyse the cranial morphology of a specimen of the type species Macrocnemus bassanii from the Besano Formation of Monte San Giorgio, Ticino, Switzerland. The skull is virtually complete and we identify and describe the braincase and palatal elements as well the atlas-axis complex for the first time. Moreover, we add to the knowledge of the morphology of the skull roof, rostrum and hemimandible, and reconstruct the cranium of M. bassanii in 3D using the rendered models of the elements. The circumorbital bones were found to be similar in morphology to those of the archosauromorphs Prolacerta broomi and Protorosaurus speneri. In addition, we confirm the palatine, vomer and pterygoid to be tooth-bearing palatal bones, but also observed heterodonty on the pterygoid and the palatine.

The most common plumage abnormalities in birds involve some form of white feathering, ranging from birds with just a few white feathers to individuals that are completely white. The causes of aberrant white feathers are diverse and, in many cases, unknown. Some are heritable, based on simple, genetically determined changes in the pigmentation process. More commonly, the causes are less clear-cut and can include environmental conditions (particularly in relation to food availability), and the physical condition and/or age of the bird. In this paper, white feathering is explored in three common species: Carrion Crow Corvus corone, Hooded Crow C. cornix and Blackbird Turdus merula. Results from the BTO Abnormal Plumage Survey are summarised, and data from a museum-based study of Blackbirds with plumage abnormalities are reported. In all three species, partly white plumage is recorded regularly and is often referred to incorrectly as albinism or leucism.